PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI13549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 123aa MW: 13770.4 Da PI: 10.5844 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.2 | 7.8e-05 | 21 | 58 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le+ ++++ Lq MCI13549.1 21 RQLIQDRIKELRELVPNgA------KCSIDSLLERSIKHMLFLQ 58 67799************77......5555567777777777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
SKNSKKRARP GESCRPRPRD RQLIQDRIKE LRELVPNGAK CSIDSLLERS IKHMLFLQGI 60 AKHADKLTKX AXTKSKLHHM ETDILGSSSS EQGSSWAVEV GGHLKVHSIL VENLSKNGQM 120 LVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.3 | 2e-38 | bHLH family protein |