PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI13303.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 61aa MW: 7271.52 Da PI: 11.2406 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 44.4 | 5.5e-14 | 5 | 48 | 48 | 91 |
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +ek r+raetr+gC+a+++v+k ++g w +tk+++eH+H+l+p MCI13303.1 5 REKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTP 48 367899***********************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 61 aa Download sequence |
MPDKREKIVR QRAETRVGCR AMIMVRKLNS GLWSITKFVK EHTHPLTPGR GRRDFVYEQY 60 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-28 | FAR1 family protein |