PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI13003.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 50aa    MW: 6042.8 Da    PI: 8.7308
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI13003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.53e-072347123
                EEET..TTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCp..dCgksFsrksnLkrHirtH 23
                + Cp  dCgk++ + + Lk+Hi +H
  MCI13003.1 23 HICPypDCGKRYAHEYKLKNHIASH 47
                689********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    
MQAFSLDFNL RSHMKTHSQE NYHICPYPDC GKRYAHEYKL KNHIASHHEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.33e-27C2H2 family protein