PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI12707.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | B3 | ||||||||
Protein Properties | Length: 123aa MW: 13841.7 Da PI: 5.2334 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.2 | 9.3e-16 | 40 | 112 | 14 | 92 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 + + lp +f+ eh ++++ +tlede+g +++ + +++++ l++GW+ F+ +++L++gD +vF+l++ +f+ MCI12707.1 40 KSMGLPSRFCVEHLP--KTGFNMTLEDEDGSEYDAVY--IGSRSG--LSGGWRAFALEHKLDDGDALVFELVEPARFKV 112 4589*********53..36789***************..555555..9**********************998666644 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
YVARPLDEIK QATEKERRRA YEAAEALQIN LQSSKPSFIK SMGLPSRFCV EHLPKTGFNM 60 TLEDEDGSEY DAVYIGSRSG LSGGWRAFAL EHKLDDGDAL VFELVEPARF KVIYVVSSHP 120 TLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 1e-32 | B3 family protein |