PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI12331.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 191aa MW: 21113.4 Da PI: 9.8834 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 99.8 | 1.6e-31 | 4 | 115 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT...............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kv tpsdv+k++rlv+pk++ae+h +++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++Lk+gD+v F++ MCI12331.1 4 FEKVVTPSDVGKLNRLVIPKQHAEKHfplqkavdcgaegsaAAAAGKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQR 102 99*************************8888888877666533344999*************************************************8 PP -SS.SEE..EEEE CS B3 85 dgr.sefelvvkv 96 + + +++l++ + MCI12331.1 103 STTgPDKQLFIDW 115 8776777777665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
EDLFEKVVTP SDVGKLNRLV IPKQHAEKHF PLQKAVDCGA EGSAAAAAGK GVLLNFEDVG 60 GKVWRFRYSY WNSSQSYVLT KGWSRFVKEK NLKAGDTVCF QRSTTGPDKQ LFIDWKARKN 120 VNEDGLFVPV GPVVEPVQMV RLFGVNILKL PGSDVNNNGN AIAGLCINGK RREMEMFTLD 180 SCKKPKIIGA L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25560.1 | 6e-63 | RAV family protein |