PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI12168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 115aa MW: 13216.3 Da PI: 10.4614 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.6 | 2.2e-31 | 4 | 80 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ +glkk+Lvfykgra kg ktdW+mhe+rl MCI12168.1 4 TGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 80 5789**************************************956677***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence |
FASTGEKEWY FYCPRDRKYR NSARPNRVTG AGFWKATGTD RPIYSSEGSK CIGLKKSLVF 60 YKGRAAKGIK TDWMMHEFRL PSLTDPLSPK KYLEKTIPAN LLHDAVMHLN RSITI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 1e-53 | NAC family protein |