PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCI12112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 78aa MW: 9222.51 Da PI: 10.4407 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 74.5 | 1.3e-23 | 18 | 73 | 3 | 57 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--S CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHn 57 Dgy+WrK G K vkg+++pr+YYrCts+ +C ++k++++ ++ +v+++ Y++ H MCI12112.1 18 DGYRWRKVGEKIVKGNPHPRHYYRCTSSaRCLARKHIQTVVDNSDVIVTYYKEAHS 73 9*************************999*************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 78 aa Download sequence |
VERVERVEKA RYVRISGDGY RWRKVGEKIV KGNPHPRHYY RCTSSARCLA RKHIQTVVDN 60 SDVIVTYYKE AHSRCTSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-22 | WRKY family protein |