PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI11209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LBD | ||||||||
Protein Properties | Length: 127aa MW: 14016.3 Da PI: 5.4372 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 61.3 | 2.7e-19 | 1 | 59 | 41 | 99 |
DUF260 41 nvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 nv+kll++++ ++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el+++++ MCI11209.1 1 NVSKLLNEVQAHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNA 59 799***************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
NVSKLLNEVQ AHQREDAVNS LAYEAEARIK DPVYGCVGAI SVLQRQVIRL QKELDATNAD 60 LIRYSTCTDH ILPNNQHQDH QATRIHEDGG GSSLVHQSPP ANFYYPSPWN NDPLGDGNFH 120 TGGGDNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27650.1 | 3e-36 | LBD family protein |