PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI11113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | Whirly | ||||||||
Protein Properties | Length: 90aa MW: 9699.1 Da PI: 8.0667 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 111.3 | 7.5e-35 | 2 | 82 | 55 | 137 |
Whirly 55 falsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 falsatev++l+ +++++sceffhdp++k+sn+G+vrk+l+++P+++ G+fv+l v n++++++++fsvPv+ aefav++++ MCI11113.1 2 FALSATEVGSLIAMGPQDSCEFFHDPSMKSSNAGQVRKSLSIKPHSN--GYFVSLIVVNTVLNTKDNFSVPVTTAEFAVMKTA 82 9*******************************************986..7*******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
RFALSATEVG SLIAMGPQDS CEFFHDPSMK SSNAGQVRKS LSIKPHSNGY FVSLIVVNTV 60 LNTKDNFSVP VTTAEFAVMK TACSVCFFST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 4e-40 | Whirly family protein |