PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI10982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 161aa MW: 18224.9 Da PI: 8.8053 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.7 | 2.1e-05 | 34 | 56 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++CgksF + L H r+H MCI10982.1 34 HKCNICGKSFXNGKALGGHRRSH 56 79*******************99 PP | |||||||
2 | zf-C2H2 | 19.8 | 2.2e-06 | 97 | 118 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k F++k L H+r+H MCI10982.1 97 RCYICNKKFPTKNALYGHMRSH 118 7********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MKRSRSSLSS DEEEDDDAKI MMKKQEVIVQ KSTHKCNICG KSFXNGKALG GHRRSHFLKK 60 KPNHHQSPEL KTPSKNIRVS CFNDDEDIDG KKNQITRCYI CNKKFPTKNA LYGHMRSHPD 120 RVCKGVSPPS NYDIQNSSSS NNSNKKEDRD DYDDGDDDGG G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56200.1 | 1e-14 | C2H2 family protein |