PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI10701.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 194aa MW: 22533.8 Da PI: 10.0921 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.1 | 0.00014 | 84 | 107 | 1 | 22 |
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 +kC +C++sF++k +L+ H + MCI10701.1 84 HKCDidNCHMSFTTKAELQLHKHN 107 799999***************866 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.3e-05 | 138 | 162 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp C+k+F+ ++ Hir+H MCI10701.1 138 FECPwkGCSKCFKWAWAMTEHIRVH 162 89*********************99 PP | |||||||
3 | zf-C2H2 | 15.1 | 6.9e-05 | 168 | 194 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H MCI10701.1 168 YQCKveGCGLSFRFISDFSRHRRKtgH 194 99*********************9777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MEHTAMDQFE FNDFIRSPCE RLRPRTGKIA CATTGKSGGD ISQHKEESPV AKRTRRPPEA 60 SVPHKDKKAS VPHKDKKVDV KKPHKCDIDN CHMSFTTKAE LQLHKHNVCP EKGCGKKKFR 120 SHKYTLIHQR VHEDDRPFEC PWKGCSKCFK WAWAMTEHIR VHTGEKPYQC KVEGCGLSFR 180 FISDFSRHRR KTGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04240.1 | 5e-57 | C2H2 family protein |