PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI10340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 114aa MW: 13410.4 Da PI: 10.2619 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.6 | 2.7e-41 | 1 | 93 | 36 | 129 |
NAM 36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++lvg+kktLvfykgrapkgek++Wvmheyrle MCI10340.1 1 DVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEQGYWKATGKDKEIFK-GKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 93 589**********888999****************************************.999*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
DVDLNKSEPW DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATEQGYWKA TGKDKEIFKG 60 KSLVGMKKTL VFYKGRAPKG EKSNWVMHEY RLEGKFSVHN LPKAAKGVSE EFSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 3e-70 | NAC family protein |