PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI10031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 158aa MW: 17620 Da PI: 10.3106 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.7e-07 | 4 | 37 | 14 | 47 |
HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqky 47 + +++G+g+W+ I++ + +Rt+ q+ s+ qky MCI10031.1 4 VGLEKMGKGDWRGISKNFVPTRTPTQVASHAQKY 37 5789***************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MFMVGLEKMG KGDWRGISKN FVPTRTPTQV ASHAQKYFLR LSTINNKKRR SSLFDLVGSK 60 NTNTKGQDNA NSIVLSHKLE DKCKCEVEIN DGTTFFKQEV VKSDKQETNY SQVNWLHNHS 120 SNYATVPNLD LTLAVSSPKK TNKSTPAGPL LFGPISVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 3e-27 | MYB_related family protein |