PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI09630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 220aa MW: 24256 Da PI: 10.0227 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 131.4 | 8.4e-41 | 100 | 196 | 2 | 96 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.k 96 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s +++ +s+ + MCI09630.1 100 PPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPSQLRSSYfN 196 789******************************************************************9998888888888876666555444434 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MEGGDDLHHH HHHHHHQHLH HQQHQQQXXX XXXXXXXXXX XXKKEDNQEA ASCSTSSPYP 60 SLAISPISPT EPSTSNSNRS NQLVSASAPT TSDPGNKKPP PKRTSTKDRH TKVEGRGRRI 120 RMPALCAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS 180 GSSMSVPSQL RSSYFNPNFS LQQRRTLFPG IGLSSSDNSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 1e-50 | TCP family protein |