PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI09552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 183aa MW: 20409.9 Da PI: 10.3167 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.1 | 3.2e-38 | 24 | 175 | 2 | 116 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 ++kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as+++ ++++ + MCI09552.1 24 TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFL-----Ppspfilgkrlrs 117 79**************************************************************99999666211111111.....1223334444444 PP TCP 89 ....................................kaaksaakskksqksaasalnlakesra 116 s +++++++++++l +++++ MCI09552.1 118 ehdeavsiaaptappgiwrpdfaqlwsfaaaqpppeV------LSISPHQQQHQHNSLFHHQQQ 175 4455566667777788888888888888765332220......222222222222333332222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MSNCKETTTN TTTTNAVEPT TNQTVKKPPS KDRHSKVDGR GRRIRMPIIC AARVFQLTRE 60 LGHKSDGQTI EWLLRQAEPS IIAATGTGTT PASFSSLSEH KPFLPPSPFI LGKRLRSEHD 120 EAVSIAAPTA PPGIWRPDFA QLWSFAAAQP PPEVLSISPH QQQHQHNSLF HHQQQQQQHN 180 QHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 8e-46 | TCP family protein |