PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07916.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family M-type_MADS
Protein Properties Length: 133aa    MW: 15344.4 Da    PI: 9.3309
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.12.2e-231664149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+i n+sn  vtfskRr+g++KKA+ELS+LC+a+va+iifs++ k + +
  MCI07916.1 16 KKITNESNMLVTFSKRRTGLFKKASELSTLCGADVALIIFSPSEKAFSF 64
                689***************************************9987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MSSERKSRGR QKIEMKKITN ESNMLVTFSK RRTGLFKKAS ELSTLCGADV ALIIFSPSEK  60
AFSFGHPNVD TVIDRYLSLV PSQNNGDMRF IEADVRELNP QLTRFNNALD IERRRSVELS  120
HMDNMNETQC WRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-40M-type_MADS family protein