PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI07820.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 79aa    MW: 8831.87 Da    PI: 6.5187
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI07820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.3e-09856247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+W++ + + + +a + + ++   +W+ +a+ +g g+t++++k ++  +
       MCI07820.1  8 GSWSAKDNKAFERALAVFDKDtpdRWSNVAQAIGGGKTPEDVKRHYELL 56
                     89********************************************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MASMSASGSW SAKDNKAFER ALAVFDKDTP DRWSNVAQAI GGGKTPEDVK RHYELLLRDI  60
RHIESGQDEK PEAPVTKWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.18e-23MYB_related family protein