PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCI07696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C3H | ||||||||
Protein Properties | Length: 217aa MW: 25864.1 Da PI: 11.0047 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 21.7 | 3.7e-07 | 42 | 65 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 +++ Cr + + tC++G+ C+F+H MCI07696.1 42 REATCRQYEE-NTCNRGGYCNFMHL 65 6789**9999.*************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MSSCVPLSVG LQFFVKFEYQ LLAHLFAGRP IIVDFSPVTD FREATCRQYE ENTCNRGGYC 60 NFMHLKRISR ELRRQLFGKR HERHSRSRSR SPYRHRSYEE WSHRSRSSKY DDRDRDRDYH 120 XDSDSRRRRT SSPGRRRGRS PSRSRSPVGR RNRSPVRDGS EERRARIEQW NREREQKEPA 180 IKVNTEETNN GNNGGHSQNA STFHENQQQH QSAQEGY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 129 | RDYHXDSDSRRRR |