PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI06638.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 62aa    MW: 6695.39 Da    PI: 4.9019
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI06638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.46.6e-122862135
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevs 35
                rW++qe+l+L+e+r++++ +++++++k+plW+evs
  MCI06638.1 28 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVS 62
                8*********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    
TTTTTTASAS VSTPETTGCI GGDASTGRWP RQETLTLLEI RSRLDPKFKE ANQKGPLWDE  60
VS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10000.15e-20Trihelix family protein