PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI05743.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 88aa    MW: 10189.6 Da    PI: 9.4076
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI05743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-171562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd  l+++++ +G+g+W+  ++  g+ R++k+c++rw +yl
       MCI05743.1 15 KGPWTNEEDNMLINYINTHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 62
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MGRSPCCDNK NGLKKGPWTN EEDNMLINYI NTHGPGNWRN LPKNAGLQRC GKSCRLRWTN  60
YLRPDIKRGR FSFEEEETII QLHSVLGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.18e-55MYB family protein