PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCH98619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 18165.6 Da PI: 9.9586 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.2 | 2.8e-48 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrF+Ptdeelv +yLk k+ + +l++ ++i+e++i+k++PwdLp +++e ++yfFs ++ ky++g+r nr+t+sgyWkatg+dk+v ++ MCH98619.1 15 LPPGFRFQPTDEELVFQYLKCKTFSYQLPA-SIIPEINICKYDPWDLPG--NHGEPDMYFFSAKEAKYRNGNRMNRSTNSGYWKATGSDKKVSVSssis 110 79****************************.89***************4..45778************************************9987777 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g g++k+Lvfy+g++p+g++t+W+mheyrl MCH98619.1 111 NGGIAGIRKSLVFYRGKSPNGTRTHWIMHEYRL 143 7778***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 159 aa Download sequence |
MEKIKFVKNG VSNKLPPGFR FQPTDEELVF QYLKCKTFSY QLPASIIPEI NICKYDPWDL 60 PGNHGEPDMY FFSAKEAKYR NGNRMNRSTN SGYWKATGSD KKVSVSSSIS NGGIAGIRKS 120 LVFYRGKSPN GTRTHWIMHE YRLVSVETTP CNQERHSSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13180.1 | 3e-58 | NAC family protein |