PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96751.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 306aa    MW: 33077.1 Da    PI: 4.6233
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96751.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.25.9e-08215235526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C ++ar G+Ck G +C+F Hg
  MCH96751.1 215 PCLYYAR-GYCKNGTSCRFLHG 235
                 8******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDPENASKIM GLLLLQDHGE KEMIRLAFGP ESLLHSVIFK ARNELGLSLN SPSTPQSQPS  60
PFHSSNPVPI SRQNSNSSRL INSGMTLPST LSIPNPSSNS ASWADDSPSM NNSSSPFYGN  120
GGVSDSIDEF QLQEQLSFLN DGNSSPSLVS KNSDLFYSQS ELSSSPNSGS IGNGVDPSFF  180
PSYGYGXXXX XRSCSVNDAA CLVSEDPNSG LGWKPCLYYA RGYCKNGTSC RFLHGGFGDG  240
GEGVGSMVGS PNKIEMLDQC HEXXXXXXXX XXXXXXXXXX XXXXXXXXXX XKSMSLLLQH  300
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