PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85402.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family VOZ
Protein Properties Length: 301aa    MW: 34196.1 Da    PI: 5.1985
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ360.37.5e-1111153011190
         VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 
                 pppsafl+pkcalwdc+rpaq  e +qdycss+h+ la neglpg+tp+lrp+gid+kdg+lfaa+ ak+ gkevgip+cegaa++k+pwna+e+fd+s
  MCH85402.1 115 PPPSAFLSPKCALWDCFRPAQ--EGCQDYCSSYHELLAKNEGLPGMTPILRPRGIDIKDGPLFAAVLAKTLGKEVGIPKCEGAASMKAPWNASEFFDIS 211
                 89*****************98..78************************************************************************** PP

         VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190
                 +leget+rewlffdkprraf+sg rkqrslpdy+grgwhesrkqvmke+gg+krsyymdpqp++  +whlyeyein+ d +alyrlelklv
  MCH85402.1 212 FLEGETVREWLFFDKPRRAFDSGTRKQRSLPDYHGRGWHESRKQVMKEHGGQKRSYYMDPQPPNR-DWHLYEYEINSHDGCALYRLELKLV 301
                 **************************************************************985.9**********************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
NCFENNQPLD HTFKGSASSL FNSPLNNSDM TQLDFHPFGL NQDMDHNAVG HNSDLLGRFN  60
LYQDQSLGHD TEIKNSESTQ FSFEEGIDCS QFFGDNDTTQ FGDNLIPNIL PNICPPPSAF  120
LSPKCALWDC FRPAQEGCQD YCSSYHELLA KNEGLPGMTP ILRPRGIDIK DGPLFAAVLA  180
KTLGKEVGIP KCEGAASMKA PWNASEFFDI SFLEGETVRE WLFFDKPRRA FDSGTRKQRS  240
LPDYHGRGWH ESRKQVMKEH GGQKRSYYMD PQPPNRDWHL YEYEINSHDG CALYRLELKL  300
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.23e-95VOZ family protein