PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85067.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 139aa    MW: 16233.5 Da    PI: 10.6058
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.51.8e-11491341298
                 HTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ++ l +p+++++++ +k  +++ + l d  +g++++  +   + +++  ++ +GWk+Fvk+++Lk +D ++F+ +   +  l ++++r
  MCH85067.1  49 GRNVLNFPRDYTRHCLKK--SDINIYLLDnATGKVFKSPIFTsSANDEDRFIYSGWKKFVKEKKLKFRDKLIFRSQ-AGNNILDIQIIR 134
                 4577899*****888544..6778999887999*****9954566666678999********************33.255545666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
DYVRMHFRAP FQWEITVSSA IAKGRNCLLY TSPXPFQWEI TVSSAIAKGR NVLNFPRDYT  60
RHCLKKSDIN IYLLDNATGK VFKSPIFTSS ANDEDRFIYS GWKKFVKEKK LKFRDKLIFR  120
SQAGNNILDI QIIRRGCSR