PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80779.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 139aa    MW: 15991.3 Da    PI: 8.7096
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.76.2e-06117139325
                 S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                  e C  f  t  C++G +C+F H
  MCH80779.1 117 KEMCILFEDTRNCPRGTTCPFRH 139
                 689******************77 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MNPPNLACCP TCNVHLNSLT TPLEHMCPKC IIGAAKFARN IALQYEDLMQ QNRKLMAKNQ  60
SLVAEYLMVS ASSSSQIQKE NDPRYKTILC TNWEKNTRXR YRNKCLYAHG IGELKDKEMC  120
ILFEDTRNCP RGTTCPFRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.18e-07C3H family protein