PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1295s0017.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 343aa    MW: 36928.1 Da    PI: 8.3428
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1295s0017.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-1294138347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+  ++ + ++lG+g+W+ I+rt    Rt+ q+ s+ qky
  Kaladp1295s0017.1.p  94 PWTEEEHRMFLLGLQKLGKGDWRGISRTYVISRTPTQVASHAQKY 138
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGLIRKSAS MGNLSHCTGS TSGSNLNGGP  60
LGSGSPGDAP DHGDGYASED FASASREKKK AGIPWTEEEH RMFLLGLQKL GKGDWRGISR  120
TYVISRTPTQ VASHAQKYFI RQSNVSRRKR RSSLFDIVAD ESVEMPMETL QENHLNHQRH  180
ADSQSSYNLP TVPSPQVSAV PSPEEENESM DSATNSNDGD ASLPRPESTP IYYPVPVIVP  240
AYVSPVFPFS VPYWPGNRAA ELPETTKPHV VLKPTAVQPK SPINVDELLG MSKLSLGVES  300
NNEAGPSGPL SLKLSEGSSR QSAFHANPAP GRSTSSNPIH AL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-109MYB_related family protein