PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1192s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GeBP

Protein Properties

Length: 452aa MW: 49874.9 Da PI: 4.4957

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1192s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.8	6.2e-37	136	235	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 klfqrlw++eDei lLqG++d+ +++g+s+ + d+ +fy+++k++++++++k+qlveK+rrLKkK+++ ++++ gke++f+++hdq + Kaladp1192s0009.1.p 136 KLFQRLWTDEDEIGLLQGFLDYSTQRGTSQNNphDTAQFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLARVSLGKEVQFKSPHDQAT 225 579***********************555446**************************************************** PP DUF573 89 felskkiWgs 98 fe++ kiWg+ Kaladp1192s0009.1.p 226 FEIATKIWGT 235 ******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MASEENQRAP IAAVKIGNSN DEEADEIDEE DGETEETEEE EEEDDGDGGM AGDHDCGVGR 60 AAAEEDEDVE IGAEEEEDRN VSLSSDPARS AVTVAVPPPS IAIVPAKRPR IVEDEALGEP 120 IGERRVSQAG DDQARKLFQR LWTDEDEIGL LQGFLDYSTQ RGTSQNNPHD TAQFYDQIKS 180 KLQLDFNKNQ LVEKLRRLKK KYRNVLARVS LGKEVQFKSP HDQATFEIAT KIWGTPQNPH 240 NSKDQQHQHQ QMRGVDVDDD MPPNFNPASA NLNLNDASNF NNFNSRGGYS NHHHHSDLMA 300 ADERKSQPEQ QKAKKRIRVK MEDSGSLMDQ KGSAVAALAS NLSPAQNPIW QPVLGLSTPS 360 LVEETVKNKI SPLMYERYGG SGVGGSGVLG DGIVSPAPLS FASPVNLFGT EVLDGRWRKQ 420 QILELEVYSK RLELVQEQIK LTLEQLRSTG S*

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MASEENQRAP IAAVKIGNSN DEEADEIDEE DGETEETEEE EEEDDGDGGM AGDHDCGVGR  60
AAAEEDEDVE IGAEEEEDRN VSLSSDPARS AVTVAVPPPS IAIVPAKRPR IVEDEALGEP  120
IGERRVSQAG DDQARKLFQR LWTDEDEIGL LQGFLDYSTQ RGTSQNNPHD TAQFYDQIKS  180
KLQLDFNKNQ LVEKLRRLKK KYRNVLARVS LGKEVQFKSP HDQATFEIAT KIWGTPQNPH  240
NSKDQQHQHQ QMRGVDVDDD MPPNFNPASA NLNLNDASNF NNFNSRGGYS NHHHHSDLMA  300
ADERKSQPEQ QKAKKRIRVK MEDSGSLMDQ KGSAVAALAS NLSPAQNPIW QPVLGLSTPS  360
LVEETVKNKI SPLMYERYGG SGVGGSGVLG DGIVSPAPLS FASPVNLFGT EVLDGRWRKQ  420
QILELEVYSK RLELVQEQIK LTLEQLRSTG S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	9e-61	GeBP family protein