PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0630s0020.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 609aa MW: 67915.1 Da PI: 9.0388

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0630s0020.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.8	2.8e-36	238	356	2	106
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssaseceaes 77 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++ ++++ +++++++ Kaladp0630s0020.1.p 238 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELppwhptattiiptaTTTATNASSQQE 327 79**************************************************************98888776555443222222222222 PP TCP 78 ssssasnsssg.......kaaksaakskksqksaas 106 + + + a++ + +++++++ ++ Kaladp0630s0020.1.p 328 RMI-------HgqvansmEDANDYTIQHQQHERVEN 356 222.......23332222333333333333322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MARTFGRGKS RNIWFQKSKS KTRRRRREGT RRNRLRRAEC TSNRSCRSRS SSNQKLEGPK 60 HTSSLSLDPH RNQHHPHHHH LYHLTQQSLN SRYVEEEEQN IDEEEGEEEE DPDQSSPKSQ 120 GAEPQQPFHT QPFPYFSNSQ QQQLHQDLQL QQQQLYARLA QQQQLQLQQP VPSPGKKRSY 180 FSPPPPSSTF AEQNSQHALQ SNMGERSSQR QTTSRLGMRN SGGGEIIEVQ GGHIVRSTGR 240 KDRHSKVCTA KGPRDRRVRL SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKAAIDELAE 300 LPPWHPTATT IIPTATTTAT NASSQQERMI HGQVANSMED ANDYTIQHQQ HERVENENNP 360 SFLPPSMDSD SIADTIKTFF PMGASAEPTS GSGMQFYPPD LLSRTSSSQN NQDLRLSLQS 420 FQDSQFLHSH HHQQHPGQTP QAIFSGNQLG FDASSGGGGW SDHQSTDINR FHRLMAWNNA 480 GGDTAGGSGG GGGGGSGGFM FNSLPPPPLS QPSLQQLFGQ SGHFFTQRGP LQSSNTSSVR 540 AWIDQPIANH HQHHQTLHDH SSTLSGIGNF QIPGAFPGFR IPARIQGDNE EQDNIHNKQS 600 SASSDSRH*

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MARTFGRGKS RNIWFQKSKS KTRRRRREGT RRNRLRRAEC TSNRSCRSRS SSNQKLEGPK  60
HTSSLSLDPH RNQHHPHHHH LYHLTQQSLN SRYVEEEEQN IDEEEGEEEE DPDQSSPKSQ  120
GAEPQQPFHT QPFPYFSNSQ QQQLHQDLQL QQQQLYARLA QQQQLQLQQP VPSPGKKRSY  180
FSPPPPSSTF AEQNSQHALQ SNMGERSSQR QTTSRLGMRN SGGGEIIEVQ GGHIVRSTGR  240
KDRHSKVCTA KGPRDRRVRL SAHTAIQFYD VQDRLGYDRP SKAVDWLIKK AKAAIDELAE  300
LPPWHPTATT IIPTATTTAT NASSQQERMI HGQVANSMED ANDYTIQHQQ HERVENENNP  360
SFLPPSMDSD SIADTIKTFF PMGASAEPTS GSGMQFYPPD LLSRTSSSQN NQDLRLSLQS  420
FQDSQFLHSH HHQQHPGQTP QAIFSGNQLG FDASSGGGGW SDHQSTDINR FHRLMAWNNA  480
GGDTAGGSGG GGGGGSGGFM FNSLPPPPLS QPSLQQLFGQ SGHFFTQRGP LQSSNTSSVR  540
AWIDQPIANH HQHHQTLHDH SSTLSGIGNF QIPGAFPGFR IPARIQGDNE EQDNIHNKQS  600
SASSDSRH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-80	TCP family protein