PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0577s0020.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 183aa    MW: 20340.9 Da    PI: 9.5861
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0577s0020.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.5e-152468147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         r +WT eE++++++a +++  + Wk+I   +g ++t  q++s+ qky
  Kaladp0577s0020.2.p 24 RENWTDEEHDKFLEALQLFDRD-WKKIEDFVG-TKTVIQIRSHAQKY 68
                         789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MASSTPTDAL EKKVRKPYTI TKSRENWTDE EHDKFLEALQ LFDRDWKKIE DFVGTKTVIQ  60
IRSHAQKYFL KVQKNGTLAH VPPPRPKRKS AHPYPQKASK NADVGPKGVT TMIGSSTAGG  120
SDSSRSFPSS EVPDQDKQAP VVHGIPDFAE VYNFIGSVFD PDTKGHVQKL KEMDPINFET  180
VS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.12e-89MYB_related family protein