PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0515s0033.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 436aa MW: 47522.1 Da PI: 7.7036

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0515s0033.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.2	7.8e-29	47	103	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg++f rsYYrCt+++C+vkk+ver++ d++++++ g+H+h+ Kaladp0515s0033.5.p 47 SDGYSWRKYGQKHVKGNKFVRSYYRCTHPDCQVKKQVERAH-DGQITDTLVFGDHDHP 103 7**************************************.*************8 PP
2	WRKY	106.9	1e-33	221	279	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC++agCpvkk+ver+++dpkvv++tYeg+H+h+ Kaladp0515s0033.5.p 221 VNDGYRWRKYGQKFVKGNPNPRSYYRCSTAGCPVKKHVERASHDPKVVITTYEGQHDHD 279 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MVATEESLRG EVASEIEKMN SPETGLLARG FDQEGGTPLV TPEKGPSDGY SWRKYGQKHV 60 KGNKFVRSYY RCTHPDCQVK KQVERAHDGQ ITDTLVFGDH DHPRTQLNLP VTISCTVVAK 120 EGVMGVPSPV IPEERTPAAP HQTPKPTVHI ATPMALNVVA SDLSKHAVVQ SIKTKDNVGK 180 DGTPDLKRQK KEPRRPEAVI MDKPTVDPRL VLQTVSEVDM VNDGYRWRKY GQKFVKGNPN 240 PRSYYRCSTA GCPVKKHVER ASHDPKVVIT TYEGQHDHDM PPARMMSNCT SGNSTNQLAL 300 EYNPGVGSDV VDESYQHGKP KDQLNGEQKI ESGEVEKVGN KLVSHSSSGL GSKVSDQISG 360 KSTDNLEAVE SSAVPDNGRE TNKGSKSPGP AAASLMAGED KKPRKERIKE EFSEAIHRNS 420 EHGSPTAGSL DESHV*

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MVATEESLRG EVASEIEKMN SPETGLLARG FDQEGGTPLV TPEKGPSDGY SWRKYGQKHV  60
KGNKFVRSYY RCTHPDCQVK KQVERAHDGQ ITDTLVFGDH DHPRTQLNLP VTISCTVVAK  120
EGVMGVPSPV IPEERTPAAP HQTPKPTVHI ATPMALNVVA SDLSKHAVVQ SIKTKDNVGK  180
DGTPDLKRQK KEPRRPEAVI MDKPTVDPRL VLQTVSEVDM VNDGYRWRKY GQKFVKGNPN  240
PRSYYRCSTA GCPVKKHVER ASHDPKVVIT TYEGQHDHDM PPARMMSNCT SGNSTNQLAL  300
EYNPGVGSDV VDESYQHGKP KDQLNGEQKI ESGEVEKVGN KLVSHSSSGL GSKVSDQISG  360
KSTDNLEAVE SSAVPDNGRE TNKGSKSPGP AAASLMAGED KKPRKERIKE EFSEAIHRNS  420
EHGSPTAGSL DESHV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	1e-77	WRKY family protein