PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0441s0001.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 227aa    MW: 25511.5 Da    PI: 7.5033
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0441s0001.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.8e-172670147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Kaladp0441s0001.2.p 26 RGNISEDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 70
                         7899******************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MSAGLNRCGK SCRLRWLNYL RPDIKRGNIS EDEEELIIRL HKLLGNRWSL IAGRLPGRTD  60
NEIKNYWNTT LGKKVGSEVS QRSSSKKGKM SKSKETSKAV PEPDSSTQPL TQPIRTKAFR  120
CTKVHIPATI HSPREDYNKH EDTKPTHSQS AQQTSSPDSG EYVVDFSQFL DFGSDEFQGI  180
DTCMGFNGQF DVPVTKDWMR SDISGLENSS MELESLGFLL DGEGWY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.11e-40MYB family protein