PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0433s0008.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 285aa    MW: 31654.4 Da    PI: 9.1511
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0433s0008.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-12556147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                         +++WT+eE+e l+ +++++G g Wk I           +Rt  ++k++w+++
  Kaladp0433s0008.1.p  5 KLKWTAEEEEALLSGIARHGAGKWKNILTDPEfapvfSKRTNIDLKDKWRNL 56
                         689****************************9*****88***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGNPKLKWTA EEEEALLSGI ARHGAGKWKN ILTDPEFAPV FSKRTNIDLK DKWRNLTVSS  60
TGHHGMKDKT RIPKLKSLMA STSSNAQRNE SLAVVPHETP LDVVMEDAPN GTHEPKNAPK  120
YNDMIFEAIS AAKDAKGLDI NAIITFIEKK QEVPPNFRRL LSSKLRRLVT QGKLDKVQNC  180
YIIKKDMLPL SLPESKTSLA PAQKETRLQH PRTNGHAMVD TAMEEASISA AYKIADAENK  240
SFLASEAVKE SERVMKMCED TECLLQIAKE IHERCSQGKI VLLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-79MYB_related family protein