PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0325s0007.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 380aa MW: 42821 Da PI: 9.1775

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0325s0007.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.7e-33	129	186	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vk+se+prsYY+Ct++gCp+kkkvers d++++ei+Y+g+Hnh+k Kaladp0325s0007.1.p 129 DDGYNWRKYGQKQVKSSENPRSYYKCTFPGCPTKKKVERSL-DGEITEIVYKGSHNHPK 186 8**************************************.*************85 PP
2	WRKY	105.2	3.5e-33	292	350	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d ++v++tYeg+Hnh+ Kaladp0325s0007.1.p 292 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSQGCTVRKHVERASHDLRAVITTYEGKHNHD 350 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGKIETYTLH LFFFYSVSLF TAQLLQSPTT GSFPAALSYH WGTLSTQKNA KQEDSRPQNR 60 NNLNNGYSDF TFQPESRTVS AQDQQQPWNS GSRPSEQKKD DISYEQGTGE IVNYQQAQTQ 120 SMREARRSDD GYNWRKYGQK QVKSSENPRS YYKCTFPGCP TKKKVERSLD GEITEIVYKG 180 SHNHPKPKST RRLSSNSFLP ISAQPMHQID GDVPERSFGS QVAPNQSDQS AATPENSSAS 240 VDDDDRSRVG GDEPDAKRWK METGGEMMSA TGCRAVQEPR VVVQTTSDID ILDDGYRWRK 300 YGQKVVKGNP NPRSYYKCTS QGCTVRKHVE RASHDLRAVI TTYEGKHNHD VPAARGSGSH 360 GRHQQKHGCH DNFQRLIHN*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGKIETYTLH LFFFYSVSLF TAQLLQSPTT GSFPAALSYH WGTLSTQKNA KQEDSRPQNR  60
NNLNNGYSDF TFQPESRTVS AQDQQQPWNS GSRPSEQKKD DISYEQGTGE IVNYQQAQTQ  120
SMREARRSDD GYNWRKYGQK QVKSSENPRS YYKCTFPGCP TKKKVERSLD GEITEIVYKG  180
SHNHPKPKST RRLSSNSFLP ISAQPMHQID GDVPERSFGS QVAPNQSDQS AATPENSSAS  240
VDDDDRSRVG GDEPDAKRWK METGGEMMSA TGCRAVQEPR VVVQTTSDID ILDDGYRWRK  300
YGQKVVKGNP NPRSYYKCTS QGCTVRKHVE RASHDLRAVI TTYEGKHNHD VPAARGSGSH  360
GRHQQKHGCH DNFQRLIHN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-101	WRKY family protein