PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0262s0019.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 422aa MW: 45393.3 Da PI: 9.8151

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0262s0019.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	55	99	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ Kaladp0262s0019.2.p 55 REKWTEEEHQKFIEALKLYGRA-WRQIEEYIG-TKTAVQIRSHAQKF 99 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MAPLQIPTAG SKSPGTSIAS GNNSQNILNA NCETDLDGSG VALKVRKPYT ISKQREKWTE 60 EEHQKFIEAL KLYGRAWRQI EEYIGTKTAV QIRSHAQKFF SKVTKESASS GEAPTEAIDI 120 PPPRPKRKPL HPYPRKFVEA PNKTRQGPSL KENGSSTISK NLETGALSPT SVLSPEVAHI 180 STSHAKAQGS GSVSATSSGS HSSSVLEKSN PIKNNSTPIK EKDLLRTLNL SGPSSHDSTS 240 VQTRKKFKDI ELTKDEGVYS EAETKFFGGV SPLKAIKLFG QTVVVTKPLD LSLGMKNVVM 300 PTATRGPLMC CVSHMDSLVG SQPYDSSPDG QLVTGGILMG ERSREKGGSK GFSVNGLISD 360 AISKAYNEET NQDSVDSKIR SSEGPILSPS EGRKGFVPYK RCVSEREAVL QMNKADCRVC 420 L*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MAPLQIPTAG SKSPGTSIAS GNNSQNILNA NCETDLDGSG VALKVRKPYT ISKQREKWTE  60
EEHQKFIEAL KLYGRAWRQI EEYIGTKTAV QIRSHAQKFF SKVTKESASS GEAPTEAIDI  120
PPPRPKRKPL HPYPRKFVEA PNKTRQGPSL KENGSSTISK NLETGALSPT SVLSPEVAHI  180
STSHAKAQGS GSVSATSSGS HSSSVLEKSN PIKNNSTPIK EKDLLRTLNL SGPSSHDSTS  240
VQTRKKFKDI ELTKDEGVYS EAETKFFGGV SPLKAIKLFG QTVVVTKPLD LSLGMKNVVM  300
PTATRGPLMC CVSHMDSLVG SQPYDSSPDG QLVTGGILMG ERSREKGGSK GFSVNGLISD  360
AISKAYNEET NQDSVDSKIR SSEGPILSPS EGRKGFVPYK RCVSEREAVL QMNKADCRVC  420
L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	3e-35	MYB_related family protein