PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0127.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 124aa    MW: 14269.6 Da    PI: 9.0353
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0127.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.82.4e-121464151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+ien + r   +s+Rrn ++KKA+ L   C++e a++++s++g++  +ss
  Kaladp0101s0127.1.p 14 KKIENPTSRLRAYSRRRNNLIKKANRLIKECGVELAIVVISPSGHMSHFSS 64
                         68**********************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MEEIKKMENM EEIKKIENPT SRLRAYSRRR NNLIKKANRL IKECGVELAI VVISPSGHMS  60
HFSSDHNMGS ILERYIDLPL EARYAHDPKL KEKQAILAQL EPIQGMENKS LYLDIQFVFS  120
SIL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.26e-12MIKC_MADS family protein