PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0221.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 457aa MW: 52392.1 Da PI: 6.5633

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0221.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.1e-08	350	397	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd++ +G g+W+ I r + + Rt+ +++++w+++l Kaladp0098s0221.1.p 350 WTLLEVIKLVDGISHYGVGRWTEIQRLFFptsTYRTPVDLRDKWRNLL 397 9************************999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MSEGKDVQHR TRVRDVEEEE TEVDHLLAEP RNDRVSVDDC FRVDNKSRDV DISGHELYTC 60 EEGDNYEKDQ VKHSDIGLDD KRSASIGPSA ACEDYLLDTE FVHKDSDCED FSREESSSTS 120 SGKPRIRNGN DHDKLCKLHL VSQRKCGCQN QIKEKTELKT PILYTSQNRR KLQSRLELGS 180 LFSTRDMDLA SFSDFHRSSI EVSVKSNPRK TEQFLSVMDL TSFSGQHQSS EEASLISNPW 240 KTKQFSPAEK SLVRLNGSEQ DMRVKGSAES SIHKRLRRPP VRYIDEFSGS VSLSDEKHSA 300 SDMFVDNLKS SHLSQLDSDE ENDLDEPEKV SLAGKGSKNC SDRRKHQMIW TLLEVIKLVD 360 GISHYGVGRW TEIQRLFFPT STYRTPVDLR DKWRNLLKAS NAWIQNDQEE KDEESQKNGH 420 RQLQKEILHR ISELGRLYPY PVKRTPTHTP KSSSRK*

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MSEGKDVQHR TRVRDVEEEE TEVDHLLAEP RNDRVSVDDC FRVDNKSRDV DISGHELYTC  60
EEGDNYEKDQ VKHSDIGLDD KRSASIGPSA ACEDYLLDTE FVHKDSDCED FSREESSSTS  120
SGKPRIRNGN DHDKLCKLHL VSQRKCGCQN QIKEKTELKT PILYTSQNRR KLQSRLELGS  180
LFSTRDMDLA SFSDFHRSSI EVSVKSNPRK TEQFLSVMDL TSFSGQHQSS EEASLISNPW  240
KTKQFSPAEK SLVRLNGSEQ DMRVKGSAES SIHKRLRRPP VRYIDEFSGS VSLSDEKHSA  300
SDMFVDNLKS SHLSQLDSDE ENDLDEPEKV SLAGKGSKNC SDRRKHQMIW TLLEVIKLVD  360
GISHYGVGRW TEIQRLFFPT STYRTPVDLR DKWRNLLKAS NAWIQNDQEE KDEESQKNGH  420
RQLQKEILHR ISELGRLYPY PVKRTPTHTP KSSSRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-20	MYB_related family protein