PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0743.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 397aa MW: 44175.4 Da PI: 4.7086

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0743.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.7	1.2e-08	16	59	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + ++++fC +++ +lC+ C ++ H+ H++v Kaladp0095s0743.1.p 16 ARACDGCMLRRARWFCASDDAFLCHACDVSVHSAnqlagrHQRV 59 578***999*******************668888889877 PP
2	CCT	65.2	1.9e-22	341	384	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a+++RY+eKr++R+F+KkirYe+RK +Ae+RpR+KGrFvk+ Kaladp0095s0743.1.p 341 RVARVTRYREKRRSRLFSKKIRYEVRKLNAEKRPRMKGRFVKRV 384 89****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MLSECQKASA IGARTARACD GCMLRRARWF CASDDAFLCH ACDVSVHSAN QLAGRHQRVR 60 ISTASLGDGV ADWDRKVTRR ARTPRNGLKG KLELKEASSL IVPEIGVEEE QSCENEDLMV 120 FQVPVFDADC GFWNEDESTS AEELHRLLEF VPDDIQYTAG HEGLSGVDSS CDNELLDSKE 180 SKKMDVVGFE NNERNYSRVK MEGGDDEIEA VLAFQFDSEL MNSDSRESLL DWDFGFESDE 240 MMVKGEEVVK MIAEQSGGEE AVPFGKGMLL LKLNCEQVMS AWDDQGCPWM DGTPPEFDPI 300 GDGWPKFPGV RDANAGPGNT NPDDENGGSS AGGGRVVSEE RVARVTRYRE KRRSRLFSKK 360 IRYEVRKLNA EKRPRMKGRF VKRVQSYVGP QIASLK*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MLSECQKASA IGARTARACD GCMLRRARWF CASDDAFLCH ACDVSVHSAN QLAGRHQRVR  60
ISTASLGDGV ADWDRKVTRR ARTPRNGLKG KLELKEASSL IVPEIGVEEE QSCENEDLMV  120
FQVPVFDADC GFWNEDESTS AEELHRLLEF VPDDIQYTAG HEGLSGVDSS CDNELLDSKE  180
SKKMDVVGFE NNERNYSRVK MEGGDDEIEA VLAFQFDSEL MNSDSRESLL DWDFGFESDE  240
MMVKGEEVVK MIAEQSGGEE AVPFGKGMLL LKLNCEQVMS AWDDQGCPWM DGTPPEFDPI  300
GDGWPKFPGV RDANAGPGNT NPDDENGGSS AGGGRVVSEE RVARVTRYRE KRRSRLFSKK  360
IRYEVRKLNA EKRPRMKGRF VKRVQSYVGP QIASLK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	352	368	RRSRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	2e-69	CO-like family protein