PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0565.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 341aa    MW: 38228.4 Da    PI: 5.4799
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0565.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.63.7e-26161210352
               RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          k ++ ++ls+yF++pi+ AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  Kaladp0095s0565.1.p 161 KVLTRKMLSQYFYMPITHAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 210
                          77999******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAAGGWSEFD NVCSEVIAKH ETSFPLSVDF SGFPMVDWDY GLPVQESLLG SLPAMEEGLQ  60
VTDHLSPPMY CHSLVDALPN SYLSQDCQHV PAETKMLTGG YVADNNELGA VVWNNQIQHQ  120
SLSLLQQEDI VVSDENEMRE VDCVGKKRAR KVKDEQFCSS KVLTRKMLSQ YFYMPITHAA  180
KELNVGLTLL KKRCRELGIR RWPHRKLMSL QTLISNVQEL GKQEGDGGKE RLKMAVEELE  240
RERKMMEELP DMQLEDKTKK LRQACFKANY KKRRMMAANG GANNGGSSAQ WSYSFRNGSG  300
SCTTSVCSSF SGINYLEEDD EMRSLLSDCF SSSDSNSLLL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.11e-47Nin-like family protein