PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0089s0053.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 359aa    MW: 38863.6 Da    PI: 8.374
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0089s0053.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.8e-10197241144
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHH.HHTTTS-HHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar.tmgkgRtlkqcksrw 44 
                          r++WT eEd+ l+ avk+ G g+W+ I r  ++  Rt+ q+  rw
  Kaladp0089s0053.1.p 197 RNPWTDEEDKELIAAVKKCGEGNWANILRgDFNGERTASQLSQRW 241
                          79*************************983344578888888888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MTHKGSDSKR RKVEITLEDV YSCVLQRYTP SAVITLCLEI AQACGNNKID WKQLAKRTST  60
GITNAREYQM LWRHLAYGHH LNEKIEEGAE LLDDESDLEI DLEAVPQGNA EDLAGAHASV  120
QVLLASGPPC NSRMPNTLAA DANLAPNEKQ NGSTSKNAQI AVNGSLQTSS QNHLPQPYKS  180
IDGLDANGRN LPFRKKRNPW TDEEDKELIA AVKKCGEGNW ANILRGDFNG ERTASQLSQR  240
WAILKRQNKN LGIGGSNING QQLSQAHLAT RNALSAALNM PITLTSSGTS LLNSSMAMPI  300
VPKVCLPKST VSMTQSNAAT SSVLEKHPSG RSLEVSTSAK HNKLTDDEFS RPSSNGTK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.19e-46MYB_related family protein