PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0088s0027.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 535aa MW: 56932.7 Da PI: 6.2502

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0088s0027.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.9	3e-10	197	241	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH.HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar.tmgkgRtlkqcksrw 44 r++WT eEd+ l+ avk+ G g+W+ I r ++ Rt+ q+ rw Kaladp0088s0027.1.p 197 RNPWTDEEDKELIAAVKKCGEGNWANILRgDFNGERTASQLSQRW 241 79*************************983344578888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MTDKESDSKR RKVEITLDDL YCCVFQRYTP SAVITLYQEI AQACANKKID WKELSRRTST 60 GITNAREYQM LWRHLAYGHP LHEKIEEEAE LMDDESDLEI DLEAVPQGSA EDLADAHASV 120 QVLLASGPPC DSRMPNTLAA DANLAPNERQ NGTTSENVQI AGNGGLHVSS QKQLSQVYKS 180 TDGPDANGSN LPFRKKRNPW TDEEDKELIA AVKKCGEGNW ANILRGDFNG ERTASQLSQR 240 WAILKRRNKN LGLGGSNING QQLSQAHLAT RNALSVALNM PVTLTSSVAM SSSTVANSIT 300 AISPTEAFPS TLSVPQVSEG GALCAPLKNR VMLKKPPVPV KPTISSNSML QAAAVAAGAR 360 IATPEDAESL LKAAQAKNAV HIMHGGGAVI KSGSISPLTP HYSGVGMPGT SLSNSSIAMP 420 VVPKLGLPKS QLAMTQSSAT PNTLLEKHPA GPSTEVSTAK QTKATDDEVS MQSSTVPTKL 480 INDSEVADRP KDCHQLNASS TEAEEASHAS SLRSEGNNPV SNEIRSSESA EDGK*

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MTDKESDSKR RKVEITLDDL YCCVFQRYTP SAVITLYQEI AQACANKKID WKELSRRTST  60
GITNAREYQM LWRHLAYGHP LHEKIEEEAE LMDDESDLEI DLEAVPQGSA EDLADAHASV  120
QVLLASGPPC DSRMPNTLAA DANLAPNERQ NGTTSENVQI AGNGGLHVSS QKQLSQVYKS  180
TDGPDANGSN LPFRKKRNPW TDEEDKELIA AVKKCGEGNW ANILRGDFNG ERTASQLSQR  240
WAILKRRNKN LGLGGSNING QQLSQAHLAT RNALSVALNM PVTLTSSVAM SSSTVANSIT  300
AISPTEAFPS TLSVPQVSEG GALCAPLKNR VMLKKPPVPV KPTISSNSML QAAAVAAGAR  360
IATPEDAESL LKAAQAKNAV HIMHGGGAVI KSGSISPLTP HYSGVGMPGT SLSNSSIAMP  420
VVPKLGLPKS QLAMTQSSAT PNTLLEKHPA GPSTEVSTAK QTKATDDEVS MQSSTVPTKL  480
INDSEVADRP KDCHQLNASS TEAEEASHAS SLRSEGNNPV SNEIRSSESA EDGK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-59	MYB_related family protein