PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0073.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 504aa MW: 56853.6 Da PI: 7.9539

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0073.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	393	440	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E e+lvd++ +G g+W+ I r++ + Rt+ +++++w+++l Kaladp0085s0073.1.p 393 WTLPEVERLVDGISHYGVGRWTEIQRHFFptsTYRTPVDLRDKWRNLL 440 *************************999**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MSEGKGVPHR TRVRDVEDEG TEVEHLLAEP RNDHVSVDDF FRVDNKTQDV NISGCESCTR 60 EGGENTQKVQ GKLSDIGLDD ERNALIGPST ACEDYLLDTE FVDKASDCED FPREGLSFEK 120 SSPETHSSGY SGSESSAIGA SESTSTSIGK SRNRNGYNDH KALCELHSVS QRKCGCPNQK 180 KENTEKKSPI LYTSQNRKKL QSRLGFLSCS GTSDTDFTSF SDLHRTSEEA SLISNPRKRK 240 QFLSAGPSIE RINESEQGEP VKGSAESSMH RRSRKPPVRY IDEFSGSMSL LEEKRSTSGT 300 ARNRMLNVRT SSENDNRHGV FRSFKLARQG FYGRSPNKSS DTIRNICGQS KEFSPVTRLD 360 SDEETDSDEP EKVSPARKGS KICGDRRKHQ MIWTLPEVER LVDGISHYGV GRWTEIQRHF 420 FPTSTYRTPV DLRDKWRNLL KASNAWIQND QEEQDEESQK NGHRQLPKEI LHRISELGRL 480 YPYPVKRTPN HTPSPTPKRS SRK*

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MSEGKGVPHR TRVRDVEDEG TEVEHLLAEP RNDHVSVDDF FRVDNKTQDV NISGCESCTR  60
EGGENTQKVQ GKLSDIGLDD ERNALIGPST ACEDYLLDTE FVDKASDCED FPREGLSFEK  120
SSPETHSSGY SGSESSAIGA SESTSTSIGK SRNRNGYNDH KALCELHSVS QRKCGCPNQK  180
KENTEKKSPI LYTSQNRKKL QSRLGFLSCS GTSDTDFTSF SDLHRTSEEA SLISNPRKRK  240
QFLSAGPSIE RINESEQGEP VKGSAESSMH RRSRKPPVRY IDEFSGSMSL LEEKRSTSGT  300
ARNRMLNVRT SSENDNRHGV FRSFKLARQG FYGRSPNKSS DTIRNICGQS KEFSPVTRLD  360
SDEETDSDEP EKVSPARKGS KICGDRRKHQ MIWTLPEVER LVDGISHYGV GRWTEIQRHF  420
FPTSTYRTPV DLRDKWRNLL KASNAWIQND QEEQDEESQK NGHRQLPKEI LHRISELGRL  480
YPYPVKRTPN HTPSPTPKRS SRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	7e-23	MYB_related family protein