PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0085s0023.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 976aa MW: 106909 Da PI: 5.7986

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0085s0023.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.6	2.8e-41	145	221	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqve+C adls+ak+yhrrhkvCe+hska+ +lv ++qrfCqqCsrfh+l efDe+krsCrrrLa+hn+rrrk++ Kaladp0085s0023.1.p 145 VCQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGTVMQRFCQQCSRFHALPEFDEGKRSCRRRLAGHNKRRRKAN 221 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MEANVGDQIR HFYGLGSSSL NPVGKRSLEW DLNDWKWDGH LFVASPLNCK PSGYSSHQLL 60 PETGGSSNNS STCSDDATIG NDTREQELLR SRRAAGGEVG DAGNLSLMLG GNGVPASEMQ 120 LTSWEGANGK KSKVVVGGSS SNRAVCQVED CGADLSKAKD YHRRHKVCEM HSKASRALVG 180 TVMQRFCQQC SRFHALPEFD EGKRSCRRRL AGHNKRRRKA NPLNVAPGTS LNDDQSNNYL 240 LLTLLKILAD LHSNRSDGAK NQDMLSHLLR SLEENTVANG GKNITEAVCA MLSNGRQALA 300 SSGGQHTLAM QEMPQNGSPS ADVSPPPSTV ISIKDSPPGY SVAPSTAAGP VKLNTFDLND 360 VYVDSADGID DLEGFRVPAN NGNSSIGCPS WMQQDVHSSS PPQVSRNSDS GSAQSPSSSS 420 GGDQIRTDRI VFKLFGKEPC DFPLALRTQI LDWLAHTPTD IESYIRPGCI VLSIYLRLAE 480 SVWDELCLDL SSSLSRLIDV SEDSFWSTGW VYVRVQDQVA FICNGQVVLD TTLPYISSAS 540 RILSVRPIAV PMSEKASFSI KGCNIFPPNS RLLCALEGQY LAHENIPESL EESSSNHNDS 600 DKLQVINYSC SIPAIIGRGF VEVEEDNGLG RDFFPFIVAE SDICSEICML ESTLEQTETD 660 ETSENGEPDA RSNAIDFIQE MGWLLRRSQL RLRFGYSNKR AEDLFHFDRF KWLMEFSLDR 720 DWCAVVKKLL DILCDGEVGS GEHDSLVAAV SDMGILHRAV RRNSRPLVEL LLRYVPEQTS 780 NNSMMKGGEL LFMPNEMGPA GLTPLHIAAG RDGAEAVLDA LTDDPNKVGI EAWQSARDST 840 GASPEDYARL RGHYSYIHLV QRKISKKSFT PGHVVLDIPN TLSDPKANKR ETTTQKSSFQ 900 ILNLPMRTGP GPCKICDQKL IYRTVNTSLA YKPAMLSMVA VAAVCVCVAL LFKSCPEVLY 960 VFHPFRWENL EYGSS*

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MEANVGDQIR HFYGLGSSSL NPVGKRSLEW DLNDWKWDGH LFVASPLNCK PSGYSSHQLL  60
PETGGSSNNS STCSDDATIG NDTREQELLR SRRAAGGEVG DAGNLSLMLG GNGVPASEMQ  120
LTSWEGANGK KSKVVVGGSS SNRAVCQVED CGADLSKAKD YHRRHKVCEM HSKASRALVG  180
TVMQRFCQQC SRFHALPEFD EGKRSCRRRL AGHNKRRRKA NPLNVAPGTS LNDDQSNNYL  240
LLTLLKILAD LHSNRSDGAK NQDMLSHLLR SLEENTVANG GKNITEAVCA MLSNGRQALA  300
SSGGQHTLAM QEMPQNGSPS ADVSPPPSTV ISIKDSPPGY SVAPSTAAGP VKLNTFDLND  360
VYVDSADGID DLEGFRVPAN NGNSSIGCPS WMQQDVHSSS PPQVSRNSDS GSAQSPSSSS  420
GGDQIRTDRI VFKLFGKEPC DFPLALRTQI LDWLAHTPTD IESYIRPGCI VLSIYLRLAE  480
SVWDELCLDL SSSLSRLIDV SEDSFWSTGW VYVRVQDQVA FICNGQVVLD TTLPYISSAS  540
RILSVRPIAV PMSEKASFSI KGCNIFPPNS RLLCALEGQY LAHENIPESL EESSSNHNDS  600
DKLQVINYSC SIPAIIGRGF VEVEEDNGLG RDFFPFIVAE SDICSEICML ESTLEQTETD  660
ETSENGEPDA RSNAIDFIQE MGWLLRRSQL RLRFGYSNKR AEDLFHFDRF KWLMEFSLDR  720
DWCAVVKKLL DILCDGEVGS GEHDSLVAAV SDMGILHRAV RRNSRPLVEL LLRYVPEQTS  780
NNSMMKGGEL LFMPNEMGPA GLTPLHIAAG RDGAEAVLDA LTDDPNKVGI EAWQSARDST  840
GASPEDYARL RGHYSYIHLV QRKISKKSFT PGHVVLDIPN TLSDPKANKR ETTTQKSSFQ  900
ILNLPMRTGP GPCKICDQKL IYRTVNTSLA YKPAMLSMVA VAAVCVCVAL LFKSCPEVLY  960
VFHPFRWENL EYGSS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein