PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 292aa    MW: 32819.5 Da    PI: 5.4212
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding414.4e-134585345
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                         +++ eE+   +++ +++G++ W++Ia +++ gRt++++k++w 
  Kaladp0079s0022.1.p 45 KFSLEEERVVIELQEEFGNK-WARIATYLP-GRTDNDVKNFWS 85
                         799*****************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MNHVNRYGPR DWSSIRSKGL LRRTGKSCRL RWVNKLRPNL KNGCKFSLEE ERVVIELQEE  60
FGNKWARIAT YLPGRTDNDV KNFWSSRKKR LARMLQPKHT APSSSPPAKP RKQSNTGDTL  120
QYVPLNWELI KHVVVVAVVD KFANEASSST PVDEQPWYVD QMSDMLPPPP PGLMLINYNP  180
SLLPLEMMMA PDQKTMSVDC PAAEFPIQVP FAPQVMPVPL SPESQELVAL LENGCLGTEG  240
VEAELRFLDD VPPHNCDVGG DNTLPPPDSF FDDFPADMFD HIESLPSPSN W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-51MYB family protein