PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0114.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 98aa    MW: 10444.3 Da    PI: 10.7081
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0114.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF611.3e-194386346
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
                          e ++n  vtfskR+ g++KKA+EL++LC+ae a+++fs+ +k+
  Kaladp0076s0114.1.p 43 MEKDTNMLVTFSKRKSGLFKKANELCTLCGAECAMMVFSPADKV 86
                         58899***********************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MFAASLEVCI SAGRLGPPSD EAPRNSSGAK KSKGRGKIRM RKMEKDTNML VTFSKRKSGL  60
FKKANELCTL CGAECAMMVF SPADKVSSPS TIRPLTT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-19M-type_MADS family protein