PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0074s0018.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 228aa    MW: 25802.5 Da    PI: 6.8709
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0074s0018.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.31.3e-101151343
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                         i n s r+ t+ kRr+ ++ K  E+S+L++ e++ i++s++
  Kaladp0074s0018.1.p 11 IPNASSRKATLRKRRECLMRKVMEISTLTGEEACGIVLSPE 51
                         7899**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MTRRKVHLAW IPNASSRKAT LRKRRECLMR KVMEISTLTG EEACGIVLSP EEGDPPVFWP  60
PSINGVLDRF FSLPEADQCK KMTTLDIFMQ EKISKMEEQV EKERRKARDQ EINYVMHSIY  120
SHGKPIDSLT SGETHQLFWF MEELKKKCEL RILHLNQENS PPDSLMVPPQ PPMMQSSVFP  180
AKCPGQPQPE HSNSSDGDTK NMAGNILGIN TNAEHKINDD PTNVATS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RRKVHLAWIPNASSRKATLRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-23M-type_MADS family protein