PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0096.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

M-type_MADS

Protein Properties

Length: 491aa MW: 54567.6 Da PI: 6.6988

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0096.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	67.2	1.6e-21	111	155	1	45
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr en+ rq+t++kR+ngilKKA+EL +LCd+++++++fs+tgk Kaladp0071s0096.1.p 111 KRLENSNSRQTTYAKRKNGILKKANELAILCDIDILLLMFSPTGK 155 689****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MEEIRCEQKL PLSSPVRAHS SVVFSAGVVI YRLRGPGPFT YGPLRPNKNA GPTRVVKWAN 60 GGGEEMEERF VRRWRFCDVP DSRVPIDDRF SWAPGLPEQA YIMGRVKLKI KRLENSNSRQ 120 TTYAKRKNGI LKKANELAIL CDIDILLLMF SPTGKPSLCC GKRGVEEVIA KFAQLTPQER 180 AKRQLEGLEA LKKTFKKLDH DVNIQEFLGT STQTVEGMTE QMVQIRAELE ETQQRLSYWS 240 DPSKIESLDH LGQMEASLGK SLDAIRAHKE NLEKQQLILQ ETTAQIQNEM QMPYRVSLEQ 300 HYQPLPWIAP NEAPHIPLSE DPNLIPQREI ECSGSSSFAT YSTYLDLCKR AQSGAFRDDS 360 GFLSELGRSS PQLISGQFSF PSYSANLLAS DAKYPADTNL QNSVHLEPQP TFGTHPAFDP 420 NHSSWASAAG PFSDTMHSSW ASACGPLADV THGVWGSTSG PCSATTANSN WASPGSYPVA 480 LFDEHYQLPH *

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MEEIRCEQKL PLSSPVRAHS SVVFSAGVVI YRLRGPGPFT YGPLRPNKNA GPTRVVKWAN  60
GGGEEMEERF VRRWRFCDVP DSRVPIDDRF SWAPGLPEQA YIMGRVKLKI KRLENSNSRQ  120
TTYAKRKNGI LKKANELAIL CDIDILLLMF SPTGKPSLCC GKRGVEEVIA KFAQLTPQER  180
AKRQLEGLEA LKKTFKKLDH DVNIQEFLGT STQTVEGMTE QMVQIRAELE ETQQRLSYWS  240
DPSKIESLDH LGQMEASLGK SLDAIRAHKE NLEKQQLILQ ETTAQIQNEM QMPYRVSLEQ  300
HYQPLPWIAP NEAPHIPLSE DPNLIPQREI ECSGSSSFAT YSTYLDLCKR AQSGAFRDDS  360
GFLSELGRSS PQLISGQFSF PSYSANLLAS DAKYPADTNL QNSVHLEPQP TFGTHPAFDP  420
NHSSWASAAG PFSDTMHSSW ASACGPLADV THGVWGSTSG PCSATTANSN WASPGSYPVA  480
LFDEHYQLPH *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03060.2	3e-85	M-type_MADS family protein