PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0070s0139.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 320aa    MW: 35305.6 Da    PI: 8.4543
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0070s0139.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.17e-1949110257
                          T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox   2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                          ++R+t+t++q+++L++l+++   r p+ e++++++++l    +++ ++V++WFqN++a+e++
  Kaladp0070s0139.1.p  49 STRWTPTTDQIRILKDLYYNngVRSPTVEQIQRISARLrqygKIEGKNVFYWFQNQKARERQ 110
                          58*****************8678*************************************97 PP
2Wus_type_Homeobox108.24.9e-3548112265
    Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                          ++tRWtPt++Qi+iL++ly+ +G+r+P+ e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Kaladp0070s0139.1.p  48 SSTRWTPTTDQIRILKDLYYnNGVRSPTVEQIQRISARLRQYGKIEGKNVFYWFQNQKARERQKR 112
                          689***************9779*****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEAQQQQHNT MMGDDLGGGK LAATSFTRAQ TNSSNNHSLV NNNGGRRSST RWTPTTDQIR  60
ILKDLYYNNG VRSPTVEQIQ RISARLRQYG KIEGKNVFYW FQNQKARERQ KRRFNTTSTT  120
NNNTAPAPLP PSSTVCKPSS LDSSTPHIHT AAAAAAAASK YSDINNNQNL IYPAGHNQMS  180
GFGYAASVTM EKSFRDCSIS TGGSSFGWAK GGMTDHHLSR HPYPHTSPYA IYNQRKSINS  240
DEYHELLASS TSDHHEHGDN RGPEIETLPL FPMHGEDINY GFCHLNSAET DGWFNRDVGS  300
GSRASLELSL NSYAGMDHT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-43WOX family protein