PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0070s0104.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 651aa MW: 72099.8 Da PI: 10.0857

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0070s0104.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	536	585	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + k+Rt ++k++w ++ Kaladp0070s0104.1.p 536 RRPFSVSEVEALVQAVEKLGTGRWRDVKLQAFdnaKHRTYVDLKDKWKTL 585 678999******************8877779************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 651 aa Download sequence
MVFQKRLDYG FSGYQVPPTP RAARSARRRA SSFKKKVDEN QMCAFDLLAT LAGKILLEGE 60 KSVGVGRCEV EQDSKKKQYL PHKSLKVEPH DSSSYQPSLK STNNVSEVHN PEPTLKLSPP 120 CSIKASSDSG HLGHPIKVKA AAFQPDPLIK PEVDKAIKSE PPVKPAVGVE AGTYSCRKFE 180 VRKLEPEPPP HSGSAANAPP LYGDHATGDT SCVKTVSRDD DEKSSGCTTH PSTLSKPYMS 240 SPPRIVDRRI RKFLAYKYWN VAPKLKDGEE AHHTDVDKQR RCCFRRQRSQ RNYPFKKRKM 300 YCHGSLSNSD DGATDKQMPC SNIDAFNSVV GTSSSIMGGN VRFKRRDSHV KLRIKSFRVP 360 ELFIEISEMA TVSSLKRTVM EAVTAILGDG LRVGVLLHGK KIGDDSKTLL QTGISHDNQL 420 DSVGFSLEPN TSPNPPSLTS ANSPHILHSE TRQPLTRYVS QEVGRGGAAD MPLTSIGNFV 480 ESDHDSAPSP DLTVDKYAAN SRAIVPVQAL KMEAAPAPPP NHRKSKHSEA GQRRIRRPFS 540 VSEVEALVQA VEKLGTGRWR DVKLQAFDNA KHRTYVDLKD KWKTLVHTAK ISPQQRRGEP 600 VPQELLDRVL DAHAYWSLQQ AKQQLKHQRE TRMFLELEPA PAPAAAHNRN *

Sequence ? help Back to Top

Protein Sequence Length: 651 aa Download sequence

MVFQKRLDYG FSGYQVPPTP RAARSARRRA SSFKKKVDEN QMCAFDLLAT LAGKILLEGE  60
KSVGVGRCEV EQDSKKKQYL PHKSLKVEPH DSSSYQPSLK STNNVSEVHN PEPTLKLSPP  120
CSIKASSDSG HLGHPIKVKA AAFQPDPLIK PEVDKAIKSE PPVKPAVGVE AGTYSCRKFE  180
VRKLEPEPPP HSGSAANAPP LYGDHATGDT SCVKTVSRDD DEKSSGCTTH PSTLSKPYMS  240
SPPRIVDRRI RKFLAYKYWN VAPKLKDGEE AHHTDVDKQR RCCFRRQRSQ RNYPFKKRKM  300
YCHGSLSNSD DGATDKQMPC SNIDAFNSVV GTSSSIMGGN VRFKRRDSHV KLRIKSFRVP  360
ELFIEISEMA TVSSLKRTVM EAVTAILGDG LRVGVLLHGK KIGDDSKTLL QTGISHDNQL  420
DSVGFSLEPN TSPNPPSLTS ANSPHILHSE TRQPLTRYVS QEVGRGGAAD MPLTSIGNFV  480
ESDHDSAPSP DLTVDKYAAN SRAIVPVQAL KMEAAPAPPP NHRKSKHSEA GQRRIRRPFS  540
VSEVEALVQA VEKLGTGRWR DVKLQAFDNA KHRTYVDLKD KWKTLVHTAK ISPQQRRGEP  600
VPQELLDRVL DAHAYWSLQQ AKQQLKHQRE TRMFLELEPA PAPAAAHNRN *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	290	299	QRNYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-108	MYB_related family protein