PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0068s0290.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 297aa    MW: 33432.8 Da    PI: 5.4242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0068s0290.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.19.7e-144585345
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                         +++ eE+ + +++ +q+G++ W++I+ +++ gRt++++k++w 
  Kaladp0068s0290.1.p 45 KFSLEEERIVIELQEQFGNK-WARISTYLP-GRTDNDVKNFWS 85
                         799*****************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MNHVNKYGPR DWSSIRSKGL LCRTGKSCRL RWVNKLRPNL KNGCKFSLEE ERIVIELQEQ  60
FGNKWARIST YLPGRTDNDV KNFWSSRKKR LARMLQAKHT SPSSPLPAKQ SNSGDTLRYL  120
PLTWEIANEA SSSTQVDEQP SCVDQSREML LPPGPIDPCL IHYNPNLLPL EMMAPEKSMN  180
VDCPAADFPI QVPFAPTMPV LPVPLSPESQ ELVARLDNGC LTHGFEQEDG TGSVDPEMMF  240
SQELPQQNSD VGGENNLAAP DSFFDDFPAD MFDHIESLPS PSNWRPIPRD KMRHTE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.16e-58MYB family protein