PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0066s0115.6.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 713aa MW: 77431.3 Da PI: 7.881

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0066s0115.6.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.7e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Kaladp0066s0115.6.p 24 RERWTEEEHGRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 713 aa Download sequence
MDMCSSGEEM VIKPRKPYTI SKQRERWTEE EHGRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFL KLEKDASGKG VLISEVRDID IPPPRPKKKP NNPYPRKISV VAPTVPAEAK 120 DGKISIPVSS CPVKKVPESQ NGVVQEKQGG EDNLEPPCTS ISLSPLVEKV SHKDQPNQHP 180 DRASAQPTTM RKDSSKNTDL DILQPSPYSA VQSVNSEHGQ SQTWSTKAST EATQSYPSKI 240 PVNAVGSSSE PVRLGSHPLF YQFLPDQLCC AHFSPNNFTS SDASATREPK SPGEIIASLD 300 HPITSFFLNN EDGYRSDIQF SSAFSKLVVS TLQQNPAAYA AARVAAASFW SNINTEAPTG 360 YCGGFPLKVM DTGGDSPSIT AITAATVAAA TAWWASNGLI PFCAPQQSLT HSQSCFTTNN 420 IVPPYAAART KTVTNEKRHP HPTVSFDQQA EVVNSPTFPG RNSAFKPLNI VPEKSEESQV 480 MLNNKQVPAT AVIGKNKSAA IDVEAHGSNN DLKDGKKVDR SSSGSNTTSS TELETDVLEK 540 HDSGNEESNA PDNAHSIGDS SSRRSRNIPN ANDSWKEVSE EGRVAFRALF SRQVLPQKFP 600 SSHDPVTLDT HTNIDEDSKL KLGGLASPID LNSNISESCC SDRVVKSNGM VRAESEGQEI 660 LHSNGVGKLK SHKTGFKPYK RSCIEPKDMT NSCSQGKEKR HKRTCLGGEA SS*

Sequence ? help Back to Top

Protein Sequence Length: 713 aa Download sequence

MDMCSSGEEM VIKPRKPYTI SKQRERWTEE EHGRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFL KLEKDASGKG VLISEVRDID IPPPRPKKKP NNPYPRKISV VAPTVPAEAK  120
DGKISIPVSS CPVKKVPESQ NGVVQEKQGG EDNLEPPCTS ISLSPLVEKV SHKDQPNQHP  180
DRASAQPTTM RKDSSKNTDL DILQPSPYSA VQSVNSEHGQ SQTWSTKAST EATQSYPSKI  240
PVNAVGSSSE PVRLGSHPLF YQFLPDQLCC AHFSPNNFTS SDASATREPK SPGEIIASLD  300
HPITSFFLNN EDGYRSDIQF SSAFSKLVVS TLQQNPAAYA AARVAAASFW SNINTEAPTG  360
YCGGFPLKVM DTGGDSPSIT AITAATVAAA TAWWASNGLI PFCAPQQSLT HSQSCFTTNN  420
IVPPYAAART KTVTNEKRHP HPTVSFDQQA EVVNSPTFPG RNSAFKPLNI VPEKSEESQV  480
MLNNKQVPAT AVIGKNKSAA IDVEAHGSNN DLKDGKKVDR SSSGSNTTSS TELETDVLEK  540
HDSGNEESNA PDNAHSIGDS SSRRSRNIPN ANDSWKEVSE EGRVAFRALF SRQVLPQKFP  600
SSHDPVTLDT HTNIDEDSKL KLGGLASPID LNSNISESCC SDRVVKSNGM VRAESEGQEI  660
LHSNGVGKLK SHKTGFKPYK RSCIEPKDMT NSCSQGKEKR HKRTCLGGEA SS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	3e-40	MYB_related family protein